FOG02916
EOG8PZGTD
sce:YPT6
Genes: 34
EOG8PZGTD
sce:YPT6
Genes: 34
SGD Description
Rab family GTPase; Ras-like GTP binding protein involved in the secretory pathway, required for fusion of endosome-derived vesicles with the late Golgi, maturation of the vacuolar carboxypeptidase Y; resides temporarily at the Golgi, dissociates into cytosol upon arrival of the Rab GTPaseYpt32p, which also functions in the late Golgi; Golgi-localized form is bound to GTP, while cytosolic form is GDP-bound; homolog of the mammalian Rab6
PomBase Description
GTPase Ryh1
AspGD Description
Rab GTPase
References
Calero M, et al. (2002 Jan 18). Saccharomyces cerevisiae Pra1p/Yip3p interacts with Yip1p and Rab proteins.
Calero M, et al. (2002 Mar 27). Identification of the novel proteins Yip4p and Yip5p as Rab GTPase interacting factors.
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0 genes with posterior transmembrane prediction > 50% |
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FOG02917
EOG8PZGTD
sce:YPT31;YPT32
Genes: 34
EOG8PZGTD
sce:YPT31;YPT32
Genes: 34
SGD Description
Rab family GTPase; involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; YPT31 has a paralog, YPT32, that arose from the whole genome duplication|Rab family GTPase involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; protein abundance increases in response to DNA replication stress; YPT32 has a paralog, YPT31, that arose from the whole genome duplication
PomBase Description
GTPase Ypt3
AspGD Description
Rab GTPase
References
Miyake S, et al. (1990 May). Identification of ras-related, YPT family genes in Schizosaccharomyces pombe.
Newman CM, et al. (1992 Jun 5). Post-translational processing of Schizosaccharomyces pombe YPT proteins.
Lai MH, et al. (1994 Mar). Identification of a gene encoding a new Ypt/Rab-like monomeric G-protein in Saccharomyces cerevisiae.
Benli M, et al. (1996 Dec 2). Two GTPase isoforms, Ypt31p and Ypt32p, are essential for Golgi function in yeast.
Kail M, et al. (1996 Jun 30). Lambda clone B22 contains a 7676 bp genomic fragment of Saccharomyces cerevisiae chromosome VII spanning the VAM7-SPM2 intergenic region and containing three novel transcribed open reading frames.
Jedd G, et al. (1997 May 5). Two new Ypt GTPases are required for exit from the yeast trans-Golgi compartment.
Yang X, et al. (1998 Sep 1). Specific binding to a novel and essential Golgi membrane protein (Yip1p) functionally links the transport GTPases Ypt1p and Ypt31p.
Albert S, et al. (1999 Nov 19). Two new members of a family of Ypt/Rab GTPase activating proteins. Promiscuity of substrate recognition.
Jones S, et al. (2000 Dec). The TRAPP complex is a nucleotide exchanger for Ypt1 and Ypt31/32.
Cheng H, et al. (2002 Aug). Role of the Rab GTP-binding protein Ypt3 in the fission yeast exocytic pathway and its connection to calcineurin function.
Calero M, et al. (2002 Jan 18). Saccharomyces cerevisiae Pra1p/Yip3p interacts with Yip1p and Rab proteins.
Ortiz D, et al. (2002 Jun 10). Ypt32 recruits the Sec4p guanine nucleotide exchange factor, Sec2p, to secretory vesicles; evidence for a Rab cascade in yeast.
Calero M, et al. (2002 Mar 27). Identification of the novel proteins Yip4p and Yip5p as Rab GTPase interacting factors.
Yamamoto K, et al. (2002 Nov). Mutation of TRS130, which encodes a component of the TRAPP II complex, activates transcription of OCH1 in Saccharomyces cerevisiae.
Hirayama S, et al. (2003 May 16). Zinc finger protein Prz1 regulates Ca2+ but not Cl- homeostasis in fission yeast. Identification of distinct branches of calcineurin signaling pathway in fission yeast.
Sims AH, et al. (2005 May). Transcriptome analysis of recombinant protein secretion by Aspergillus nidulans and the unfolded-protein response in vivo.
He Y, et al. (2006 Mar). Genetic and functional interaction between Ryh1 and Ypt3: two Rab GTPases that function in S. pombe secretory pathway.
Ma Y, et al. (2006 Nov). Genetic evidence for phospholipid-mediated regulation of the Rab GDP-dissociation inhibitor in fission yeast.
Miyatake M, et al. (2007 Apr). Valproic acid affects membrane trafficking and cell-wall integrity in fission yeast.
Nofal S, et al. (2007 Feb 7). Primed vesicles can be distinguished from docked vesicles by analyzing their mobility.
Fang Y, et al. (2008 Apr). Cation diffusion facilitator Cis4 is implicated in Golgi membrane trafficking via regulating zinc homeostasis in fission yeast.
Fang Y, et al. (2009 Jun). Pleiotropic phenotypes caused by an opal nonsense mutation in an essential gene encoding HMG-CoA reductase in fission yeast.
Tatebe H, et al. (2010 Nov 23). Rab-family GTPase regulates TOR complex 2 signaling in fission yeast.
Lo Presti L, et al. (2011 Dec 20). Shaping fission yeast cells by rerouting actin-based transport on microtubules.
Jourdain I, et al. (2012 Nov). Fission yeast sec3 bridges the exocyst complex to the actin cytoskeleton.
Zou S, et al. (2013 Feb). Trs130 participates in autophagy through GTPases Ypt31/32 in Saccharomyces cerevisiae.
Carpy A, et al. (2014 Aug). Absolute proteome and phosphoproteome dynamics during the cell cycle of Schizosaccharomyces pombe (Fission Yeast).
Li C, et al. (2014 Mar). Functional link between Rab GTPase-mediated membrane trafficking and PI4,5P2 signaling.
Pinar M, et al. (2015 Apr 7). TRAPPII regulates exocytic Golgi exit by mediating nucleotide exchange on the Ypt31 ortholog RabERAB11.
Beckley JR, et al. (2015 Dec). A Degenerate Cohort of Yeast Membrane Trafficking DUBs Mediates Cell Polarity and Survival.
Wang N, et al. (2016 Apr). Roles of the TRAPP-II Complex and the Exocyst in Membrane Deposition during Fission Yeast Cytokinesis.
Merlini L, et al. (2016 Apr 25). Local Pheromone Release from Dynamic Polarity Sites Underlies Cell-Cell Pairing during Yeast Mating.
Hu L, et al. (2016 Aug). Genetic evidence for involvement of membrane trafficking in the action of 5-fluorouracil.
Imada K, et al. (2016 Nov 1). The exocytic Rabs Ypt3 and Ypt2 regulate the early step of biogenesis of the spore plasma membrane in fission yeast.
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FOG02918
EOG8PZGTD
sce:YPT52
Genes: 33
EOG8PZGTD
sce:YPT52
Genes: 33
SGD Description
Endosomal Rab family GTPase; required for vacuolar protein sorting, endocytosis and multivesicular body (MVB) biogenesis and sorting; required for localization of the CORVET complex to endosomes; involved in autophagy and ionic stress tolerance; similar to Vps21p and Ypt53p; mammalian Rab5 homolog; protein abundance increases in response to DNA replication stress
PomBase Description
GTPase Ypt5
AspGD Description
Rab5-like GTPase
References
Singer-Krüger B, et al. (1994 Apr). Role of three rab5-like GTPases, Ypt51p, Ypt52p, and Ypt53p, in the endocytic and vacuolar protein sorting pathways of yeast.
Cho JH, et al. (2000 Mar 10). Proteins in the early golgi compartment of Saccharomyces cerevisiae immunoisolated by Sed5p.
Calero M, et al. (2002 Jan 18). Saccharomyces cerevisiae Pra1p/Yip3p interacts with Yip1p and Rab proteins.
Calero M, et al. (2002 Mar 27). Identification of the novel proteins Yip4p and Yip5p as Rab GTPase interacting factors.
Sims AH, et al. (2005 May). Transcriptome analysis of recombinant protein secretion by Aspergillus nidulans and the unfolded-protein response in vivo.
Abenza JF, et al. (2010 Aug 1). Aspergillus RabB Rab5 integrates acquisition of degradative identity with the long distance movement of early endosomes.
Liu Y, et al. (2011 May). Non-SCF-type F-box protein Roy1/Ymr258c interacts with a Rab5-like GTPase Ypt52 and inhibits Ypt52 function.
Starita LM, et al. (2012 Jan). Sites of ubiquitin attachment in Saccharomyces cerevisiae.
Peñalva MA, et al. (2012 Jan 1). Searching for gold beyond mitosis: Mining intracellular membrane traffic in Aspergillus nidulans.
Abenza JF, et al. (2012 May). Endosomal maturation by Rab conversion in Aspergillus nidulans is coupled to dynein-mediated basipetal movement.
Pinar M, et al. (2013 Jul). Live-cell imaging of Aspergillus nidulans autophagy: RAB1 dependence, Golgi independence and ER involvement.
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0 genes with posterior transmembrane prediction > 50% |
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FOG02919
EOG8PZGTD
sce:SEC4
Genes: 33
EOG8PZGTD
sce:SEC4
Genes: 33
SGD Description
Rab family GTPase; essential for vesicle-mediated exocytic secretion and autophagy; associates with the exocyst component Sec15p and may regulate polarized delivery of transport vesicles to the exocyst at the plasma membrane
PomBase Description
GTPase Ypt2
AspGD Description
Putative Rab GTPase; required for protein secretion on glucose but not on maltodextrin as carbon source; induced by caspofungin
References
Salminen A, et al. (1987 May 22). A ras-like protein is required for a post-Golgi event in yeast secretion.
Pertuiset B, et al. (1995 Jan). Molecular cloning of Rab-related genes in the yeast Yarrowia lipolytica. Analysis of RYL1, an essential gene encoding a SEC4 homologue.
Walch-Solimena C, et al. (1997 Jun 30). Sec2p mediates nucleotide exchange on Sec4p and is involved in polarized delivery of post-Golgi vesicles.
Clément M, et al. (1998 May). Isolation and characterization of the Candida albicans SEC4 gene.
Mao Y, et al. (1999 Dec). Overexpression of a dominant-negative allele of SEC4 inhibits growth and protein secretion in Candida albicans.
Stroupe C, et al. (2000 Dec 8). Crystal structures of a Rab protein in its inactive and active conformations.
Calero M, et al. (2002 Jan 18). Saccharomyces cerevisiae Pra1p/Yip3p interacts with Yip1p and Rab proteins.
Calero M, et al. (2002 Mar 27). Identification of the novel proteins Yip4p and Yip5p as Rab GTPase interacting factors.
Sims AH, et al. (2005 May). Transcriptome analysis of recombinant protein secretion by Aspergillus nidulans and the unfolded-protein response in vivo.
Grosshans BL, et al. (2006 Jan 2). The yeast lgl family member Sro7p is an effector of the secretory Rab GTPase Sec4p.
Harris SD, et al. (2009 Mar). Morphology and development in Aspergillus nidulans: a complex puzzle.
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0 genes with posterior transmembrane prediction > 50% |
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FOG02920
EOG8PZGTD
sce:YPT7
Genes: 33
EOG8PZGTD
sce:YPT7
Genes: 33
SGD Description
Rab family GTPase; GTP-binding protein of the rab family; required for homotypic fusion event in vacuole inheritance, for endosome-endosome fusion; interacts with the cargo selection/retromer complex for retrograde sorting; similar to mammalian Rab7
PomBase Description
GTPase Ypt7
AspGD Description
Ortholog(s) have GTPase activity
References
Wichmann H, et al. (1992 Dec 24). Endocytosis in yeast: evidence for the involvement of a small GTP-binding protein (Ypt7p).
Haas A, et al. (1995 Nov 1). The GTPase Ypt7p of Saccharomyces cerevisiae is required on both partner vacuoles for the homotypic fusion step of vacuole inheritance.
Lazar T, et al. (2002 Dec). A novel phospholipid-binding protein from the yeast Saccharomyces cerevisiae with dual binding specificities for the transport GTPase Ypt7p and the Sec1-related Vps33p.
Calero M, et al. (2002 Mar 27). Identification of the novel proteins Yip4p and Yip5p as Rab GTPase interacting factors.
Ohsumi K, et al. (2002 May 29). Cloning and characterization of a gene (avaA) from Aspergillus nidulans encoding a small GTPase involved in vacuolar biogenesis.
Muthuvijayan V, et al. (2004). In silico reconstruction of nutrient-sensing signal transduction pathways in Aspergillus nidulans.
Oka M, et al. (2004 Mar 12). Molecular cloning and functional characterization of avaB, a gene encoding Vam6p/Vps39p-like protein in Aspergillus nidulans.
Sims AH, et al. (2005 May). Transcriptome analysis of recombinant protein secretion by Aspergillus nidulans and the unfolded-protein response in vivo.
Mogensen J, et al. (2006 Aug). Transcription analysis using high-density micro-arrays of Aspergillus nidulans wild-type and creA mutant during growth on glucose or ethanol.
Chanda A, et al. (2009 Nov 17). A key role for vesicles in fungal secondary metabolism.
Starita LM, et al. (2012 Jan). Sites of ubiquitin attachment in Saccharomyces cerevisiae.
Abenza JF, et al. (2012 May). Endosomal maturation by Rab conversion in Aspergillus nidulans is coupled to dynein-mediated basipetal movement.
Pinar M, et al. (2013 Jul). Live-cell imaging of Aspergillus nidulans autophagy: RAB1 dependence, Golgi independence and ER involvement.
Pinar M, et al. (2015 Apr 7). TRAPPII regulates exocytic Golgi exit by mediating nucleotide exchange on the Ypt31 ortholog RabERAB11.
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0 genes with posterior transmembrane prediction > 50% |
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FOG02921
EOG8PZGTD
sce:VPS21
Genes: 32
EOG8PZGTD
sce:VPS21
Genes: 32
SGD Description
Endosomal Rab family GTPase; required for endocytic transport and sorting of vacuolar hydrolases; required for endosomal localization of the CORVET complex; required with YPT52 for MVB biogenesis and sorting; involved in autophagy and ionic stress tolerance; geranylgeranylation required for membrane association; protein abundance increases in response to DNA replication stress; mammalian Rab5 homolog; VPS21 has a paralog, YPT53, that arose from the whole genome duplication
AspGD Description
Ortholog(s) have GTP binding, GTPase activity
References
Singer-Krüger B, et al. (1994 Apr). Role of three rab5-like GTPases, Ypt51p, Ypt52p, and Ypt53p, in the endocytic and vacuolar protein sorting pathways of yeast.
Horazdovsky BF, et al. (1994 Mar 15). VPS21 encodes a rab5-like GTP binding protein that is required for the sorting of yeast vacuolar proteins.
Peterson MR, et al. (1999 Feb 11). Vac1p coordinates Rab and phosphatidylinositol 3-kinase signaling in Vps45p-dependent vesicle docking/fusion at the endosome.
Tall GG, et al. (1999 Jun). The phosphatidylinositol 3-phosphate binding protein Vac1p interacts with a Rab GTPase and a Sec1p homologue to facilitate vesicle-mediated vacuolar protein sorting.
Hama H, et al. (1999 May 21). Vps9p is a guanine nucleotide exchange factor involved in vesicle-mediated vacuolar protein transport.
Albert S, et al. (1999 Nov 19). Two new members of a family of Ypt/Rab GTPase activating proteins. Promiscuity of substrate recognition.
Esters H, et al. (2000 Apr 21). High-resolution crystal structure of S. cerevisiae Ypt51(DeltaC15)-GppNHp, a small GTP-binding protein involved in regulation of endocytosis.
Gerrard SR, et al. (2000 Feb). VPS21 controls entry of endocytosed and biosynthetic proteins into the yeast prevacuolar compartment.
Du LL, et al. (2001 May). Yeast rab GTPase-activating protein Gyp1p localizes to the Golgi apparatus and is a negative regulator of Ypt1p.
Misu K, et al. (2003 Feb). Cdc50p, a conserved endosomal membrane protein, controls polarized growth in Saccharomyces cerevisiae.
Sickmann A, et al. (2003 Nov 11). The proteome of Saccharomyces cerevisiae mitochondria.
Sims AH, et al. (2005 May). Transcriptome analysis of recombinant protein secretion by Aspergillus nidulans and the unfolded-protein response in vivo.
Abenza JF, et al. (2009 Jan). Long-distance movement of Aspergillus nidulans early endosomes on microtubule tracks.
Abenza JF, et al. (2010 Aug 1). Aspergillus RabB Rab5 integrates acquisition of degradative identity with the long distance movement of early endosomes.
Hervás-Aguilar A, et al. (2010 Jul). Characterization of Aspergillus nidulans DidB Did2, a non-essential component of the multivesicular body pathway.
Zhang J, et al. (2010 Oct 15). The microtubule plus-end localization of Aspergillus dynein is important for dynein-early-endosome interaction but not for dynein ATPase activation.
Pantazopoulou A, et al. (2011 Apr). Characterization of Aspergillus nidulans RabC/Rab6.
Wendland J, et al. (2011 Dec). Genome evolution in the eremothecium clade of the Saccharomyces complex revealed by comparative genomics.
Zhang J, et al. (2011 Jun 27). The p25 subunit of the dynactin complex is required for dynein-early endosome interaction.
Peñalva MA, et al. (2012 Jan 1). Searching for gold beyond mitosis: Mining intracellular membrane traffic in Aspergillus nidulans.
Abenza JF, et al. (2012 May). Endosomal maturation by Rab conversion in Aspergillus nidulans is coupled to dynein-mediated basipetal movement.
Pinar M, et al. (2013 Jul). Live-cell imaging of Aspergillus nidulans autophagy: RAB1 dependence, Golgi independence and ER involvement.
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0 genes with posterior transmembrane prediction > 50% |
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FOG02922
EOG8PZGTD
sce:YPT1
Genes: 32
EOG8PZGTD
sce:YPT1
Genes: 32
SGD Description
Rab family GTPase; involved in the ER-to-Golgi step of the secretory pathway; complex formation with the Rab escort protein Mrs6p is required for prenylation of Ypt1p by protein geranylgeranyltransferase type II (Bet2p-Bet4p); binds to unspliced HAC1 mRNA; regulates unfolded protein response (UPR) by promoting the decay of HAC1 RNA
PomBase Description
GTPase Ypt1
AspGD Description
Rab GTPase
References
Gallwitz D, et al. (1983 Dec 15-21). A yeast gene encoding a protein homologous to the human c-has/bas proto-oncogene product.
Wagner P, et al. (1987 Aug). Biochemical properties of the ras-related YPT protein in yeast: a mutational analysis.
Molenaar CM, et al. (1988 Apr). A carboxyl-terminal cysteine residue is required for palmitic acid binding and biological activity of the ras-related yeast YPT1 protein.
Schmitt HD, et al. (1988 May 20). Study of a temperature-sensitive mutant of the ras-related YPT1 gene product in yeast suggests a role in the regulation of intracellular calcium.
Becker J, et al. (1991 Apr). Mutational analysis of the putative effector domain of the GTP-binding Ypt1 protein in yeast suggests specific regulation by a novel GAP activity.
Jedd G, et al. (1995 Nov). The Ypt1 GTPase is essential for the first two steps of the yeast secretory pathway.
Bauer BE, et al. (1996 Oct). Amino- and carboxy-terminal domains of the yeast Rab escort protein are both required for binding of Ypt small G proteins.
Day GJ, et al. (1998 Dec). Distinct subclasses of small GTPases interact with guanine nucleotide exchange factors in a similar manner.
Richardson CJ, et al. (1998 Feb). GTP hydrolysis is not important for Ypt1 GTPase function in vesicular transport.
Yoo JS, et al. (1999 Feb). Functional implications of genetic interactions between genes encoding small GTPases involved in vesicular transport in yeast.
Jones S, et al. (2000 Dec). The TRAPP complex is a nucleotide exchanger for Ypt1 and Ypt31/32.
Du LL, et al. (2001 May). Yeast rab GTPase-activating protein Gyp1p localizes to the Golgi apparatus and is a negative regulator of Ypt1p.
Calero M, et al. (2002 Jan 18). Saccharomyces cerevisiae Pra1p/Yip3p interacts with Yip1p and Rab proteins.
Morsomme P, et al. (2002 Mar). The Rab GTPase Ypt1p and tethering factors couple protein sorting at the ER to vesicle targeting to the Golgi apparatus.
Calero M, et al. (2002 Mar 27). Identification of the novel proteins Yip4p and Yip5p as Rab GTPase interacting factors.
De Antoni A, et al. (2002 Oct 25). Significance of GTP hydrolysis in Ypt1p-regulated endoplasmic reticulum to Golgi transport revealed by the analysis of two novel Ypt1-GAPs.
Calero M, et al. (2003 May). Dual prenylation is required for Rab protein localization and function.
Rak A, et al. (2003 Oct 24). Structure of Rab GDP-dissociation inhibitor in complex with prenylated YPT1 GTPase.
Lafourcade C, et al. (2004 May). The GTPase-activating enzyme Gyp1p is required for recycling of internalized membrane material by inactivation of the Rab/Ypt GTPase Ypt1p.
Sims AH, et al. (2005 May). Transcriptome analysis of recombinant protein secretion by Aspergillus nidulans and the unfolded-protein response in vivo.
Lynch-Day MA, et al. (2010 Apr 27). Trs85 directs a Ypt1 GEF, TRAPPIII, to the phagophore to promote autophagy.
Starita LM, et al. (2012 Jan). Sites of ubiquitin attachment in Saccharomyces cerevisiae.
Pinar M, et al. (2013 Jul). Acute inactivation of the Aspergillus nidulans Golgi membrane fusion machinery: correlation of apical extension arrest and tip swelling with cisternal disorganization.
Pinar M, et al. (2013 Jul). Live-cell imaging of Aspergillus nidulans autophagy: RAB1 dependence, Golgi independence and ER involvement.
Pinar M, et al. (2015 Apr 7). TRAPPII regulates exocytic Golgi exit by mediating nucleotide exchange on the Ypt31 ortholog RabERAB11.
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0 genes with posterior transmembrane prediction > 50% |
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FOG02923
EOG8PZGTD
sce:absent
Genes: 13
EOG8PZGTD
sce:absent
Genes: 13
PomBase Description
GTPase Ypt4
AspGD Description
Ortholog(s) have cytosol, nucleus localization
References
Bone N, et al. (1998 Jan 29). Regulated vacuole fusion and fission in Schizosaccharomyces pombe: an osmotic response dependent on MAP kinases.
Liu NN, et al. (2010 Aug). A genome-wide screen for Schizosaccharomyces pombe deletion mutants that affect telomere length.
Sideri T, et al. (2014 Dec 1). Parallel profiling of fission yeast deletion mutants for proliferation and for lifespan during long-term quiescence.
Rains A, et al. (2017). <i>Ypt4</i> and <i>lvs1</i> regulate vacuolar size and function in <i>Schizosaccharomyces pombe</i>.
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0 genes with posterior transmembrane prediction > 50% |
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FOG02924
EOG8PZGTD
sce:absent
Genes: 12
EOG8PZGTD
sce:absent
Genes: 12
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0 genes with posterior transmembrane prediction > 50% |
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FOG02925
EOG8PZGTD
sce:absent
Genes: 9
EOG8PZGTD
sce:absent
Genes: 9
AspGD Description
Has domain(s) with predicted GTP binding, GTPase activity and role in intracellular protein transport, nucleocytoplasmic transport, protein transport, signal transduction, small GTPase mediated signal transduction
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0 genes with posterior transmembrane prediction > 50% |
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FOG02926
EOG8PZGTD
sce:absent
Genes: 8
EOG8PZGTD
sce:absent
Genes: 8
AspGD Description
Has domain(s) with predicted GTP binding activity and role in protein transport, small GTPase mediated signal transduction
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0 genes with posterior transmembrane prediction > 50% |
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FOG02927
EOG8PZGTD
sce:YPT10
Genes: 5
EOG8PZGTD
sce:YPT10
Genes: 5
SGD Description
Rab family GTP-binding protein; contains the PEST signal sequence specific for proteolytic enzymes; may be involved in vesicular transport; overexpression leads to accumulation of Golgi-like cisternae with budding vesicles
References
Louvet O, et al. (1999 Jun). Characterization of the ORF YBR264c in Saccharomyces cerevisiae, which encodes a new yeast Ypt that is degraded by a proteasome-dependent mechanism.
Calero M, et al. (2002 Jan 18). Saccharomyces cerevisiae Pra1p/Yip3p interacts with Yip1p and Rab proteins.
Calero M, et al. (2002 Mar 27). Identification of the novel proteins Yip4p and Yip5p as Rab GTPase interacting factors.
Kellis M, et al. (2003 May 15). Sequencing and comparison of yeast species to identify genes and regulatory elements.
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0 genes with posterior transmembrane prediction > 50% |
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FOG02928
EOG8PZGTD
sce:absent
Genes: 3
EOG8PZGTD
sce:absent
Genes: 3
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0 genes with posterior transmembrane prediction > 50% |
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FOG02929
EOG8PZGTD
sce:YPT53
Genes: 2
EOG8PZGTD
sce:YPT53
Genes: 2
SGD Description
Stress-induced Rab family GTPase; required for vacuolar protein sorting and endocytosis; involved in ionic stress tolerance; similar to Vps21p and Ypt52p; functional homolog of Vps21p; mammalian Rab5 homolog; YPT53 has a paralog, VPS21, that arose from the whole genome duplication
PomBase Description
GTPase Ypt71
References
Singer-Krüger B, et al. (1994 Apr). Role of three rab5-like GTPases, Ypt51p, Ypt52p, and Ypt53p, in the endocytic and vacuolar protein sorting pathways of yeast.
Steinmetz LM, et al. (2002 Mar 21). Dissecting the architecture of a quantitative trait locus in yeast.
Deutschbauer AM, et al. (2005 Dec). Quantitative trait loci mapped to single-nucleotide resolution in yeast.
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0 genes with posterior transmembrane prediction > 50% |
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