FOG03304
EOG8QRFK2

sce:TY3B-G;TY3A-I;TY3B-I;TY3A-G

Genes: 41

SGD Description
Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes||Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes|Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag


PomBase Description
retrotransposable element/transposon Tf2-type


AspGD Description
Has domain(s) with predicted RNA binding, RNA-directed DNA polymerase activity and role in RNA-dependent DNA replication


References

Hansen LJ, et al. (1988 Dec). Ty3, a yeast retrotransposon associated with tRNA genes, has homology to animal retroviruses.

Clark DJ, et al. (1988 Jan 25). A yeast sigma composite element, TY3, has properties of a retrotransposon.

Hansen LJ, et al. (1990 Jun). Characterization of a transpositionally active Ty3 element and identification of the Ty3 integrase protein.

Hansen LJ, et al. (1992 Mar). Ty3 GAG3 and POL3 genes encode the components of intracellular particles.

Kirchner J, et al. (1993 Jan). Proteolytic processing of Ty3 proteins is required for transposition.

Farabaugh PJ, et al. (1993 Jul 16). A novel programed frameshift expresses the POL3 gene of retrotransposon Ty3 of yeast: frameshifting without tRNA slippage.

Orlinsky KJ, et al. (1994 Jul). The Cys-His motif of Ty3 NC can be contributed by Gag3 or Gag3-Pol3 polyproteins.

Gabus C, et al. (1998 Aug 17). The yeast Ty3 retrotransposon contains a 5'-3' bipartite primer-binding site and encodes nucleocapsid protein NCp9 functionally homologous to HIV-1 NCp7.

Kim JM, et al. (1998 May). Transposable elements and genome organization: a comprehensive survey of retrotransposons revealed by the complete Saccharomyces cerevisiae genome sequence.

Cristofari G, et al. (1999 Dec 17). Characterization of active reverse transcriptase and nucleoprotein complexes of the yeast retrotransposon Ty3 in vitro.

Claypool JA, et al. (2001 Feb). Ten-kilodalton domain in Ty3 Gag3-Pol3p between PR and RT is dispensable for Ty3 transposition.

Lesage P, et al. (2005). Happy together: the life and times of Ty retrotransposons and their hosts.

Kuznetsov YG, et al. (2005 Jul). Investigation by atomic force microscopy of the structure of Ty3 retrotransposon particles.

Carpy A, et al. (2014 Aug). Absolute proteome and phosphoproteome dynamics during the cell cycle of Schizosaccharomyces pombe (Fission Yeast).

Lipp JJ, et al. (2015 Aug). SR protein kinases promote splicing of nonconsensus introns.

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%

FOG03305
EOG86DJKJ

sce:absent

Genes: 28

PomBase Description
L-azetidine-2-carboxylic acid acetyltransferase Aca1


AspGD Description
Ortholog(s) have azetidine-2-carboxylic acid acetyltransferase activity and cytosol, nucleus localization


References

Chen D, et al. (2003 Jan). Global transcriptional responses of fission yeast to environmental stress.

Nomura M, et al. (2003 Jan). Characterization of novel acetyltransferases found in budding and fission yeasts that detoxify a proline analogue, azetidine-2-carboxylic acid.

Iwaki T, et al. (2004 Jul 30). Characterization of end4+, a gene required for endocytosis in Schizosaccharomyces pombe.

Stewart EV, et al. (2011 Apr 22). Yeast SREBP cleavage activation requires the Golgi Dsc E3 ligase complex.

Nützmann HW, et al. (2011 Aug 23). Bacteria-induced natural product formation in the fungus Aspergillus nidulans requires Saga/Ada-mediated histone acetylation.

Du W, et al. (2012 Sep 15). TORC2 and the AGC kinase Gad8 regulate phosphorylation of the ribosomal protein S6 in fission yeast.

Carpy A, et al. (2014 Aug). Absolute proteome and phosphoproteome dynamics during the cell cycle of Schizosaccharomyces pombe (Fission Yeast).

Rallis C, et al. (2014 Feb 15). Systematic screen for mutants resistant to TORC1 inhibition in fission yeast reveals genes involved in cellular ageing and growth.

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%

FOG03306
EOG86DJKJ

sce:SPT10

Genes: 27

SGD Description
Putative histone acetylase with a role in transcriptional silencing; sequence-specific activator of histone genes, binds specifically and cooperatively to pairs of UAS elements in core histone promoters, functions at or near the TATA box


AspGD Description
Ortholog(s) have sequence-specific DNA binding activity


References

Yamashita I, et al. (1993 Dec). Isolation and characterization of the SUD1 gene, which encodes a global repressor of core promoter activity in Saccharomyces cerevisiae.

Natsoulis G, et al. (1994 Jan). The SPT10 and SPT21 genes of Saccharomyces cerevisiae.

Nützmann HW, et al. (2011 Aug 23). Bacteria-induced natural product formation in the fungus Aspergillus nidulans requires Saga/Ada-mediated histone acetylation.

Wendland J, et al. (2011 Dec). Genome evolution in the eremothecium clade of the Saccharomyces complex revealed by comparative genomics.

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 2 genes with posterior transmembrane prediction > 50%

FOG03307
EOG82RBXZ
EOG86DJKJ
EOG88GTKZ
EOG8H712K
EOG8QRFK2
EOG8VMCZB

sce:absent

Genes: 22

 





 

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%

FOG03308
EOG8QRFK2

sce:absent

Genes: 18

AspGD Description
Has domain(s) with predicted RNA binding, RNA-directed DNA polymerase activity and role in RNA-dependent DNA replication

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 3 genes with posterior transmembrane prediction > 50%

FOG03309
EOG8QRFK2

sce:absent

Genes: 6

 





 

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%

FOG03310
EOG8QRFK2

sce:absent

Genes: 2

 





 

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%

FOG03311
EOG8QRFK2

sce:absent

Genes: 10

AspGD Description
Protein of unknown function|Protein of unknown function

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 2 genes with posterior transmembrane prediction > 50%

FOG03312
EOG8VMCZB

sce:absent

Genes: 1

 





 

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%

FOG03313
EOG86DJKJ

sce:absent

Genes: 1

 





 

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 1 genes with posterior transmembrane prediction > 50%