FOG02882
EOG8QBZPJ

sce:NAM8;NGR1

Genes: 54

SGD Description
RNA binding protein, component of the U1 snRNP protein; mutants are defective in meiotic recombination and in formation of viable spores, involved in the formation of DSBs through meiosis-specific splicing of REC107 pre-mRNA; Nam8p regulon embraces the meiotic pre-mRNAs of REC107, HFM1, AMA1 SPO22 and PCH2; the putative RNA binding domains RRM2 and RRM3 are required for Nam8p meiotic function|RNA binding protein that negatively regulates growth rate; interacts with the 3' UTR of the mitochondrial porin (POR1) mRNA and enhances its degradation; overexpression impairs mitochondrial function; interacts with Dhh1p to mediate POR1 mRNA decay; expressed in stationary phase


PomBase Description
mRNA processing factor


AspGD Description
Ortholog(s) have mRNA binding activity, role in arginine catabolic process, positive regulation of cellular response to oxidative stress, positive regulation of nuclear-transcribed mRNA poly(A) tail shortening and cytosol localization


References

Ekwall K, et al. (1992 May). The NAM8 gene in Saccharomyces cerevisiae encodes a protein with putative RNA binding motifs and acts as a suppressor of mitochondrial splicing deficiencies when overexpressed.

Lee FJ, et al. (1993 Jul 15). An RNA-binding protein gene (RBP1) of Saccharomyces cerevisiae encodes a putative glucose-repressible protein containing two RNA recognition motifs.

Kupfer DM, et al. (2004 Oct). Introns and splicing elements of five diverse fungi.

Gruhler A, et al. (2005 Mar). Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway.

Olszewska A, et al. (2007 Dec). Arginine catabolism in Aspergillus nidulans is regulated by the rrmA gene coding for the RNA-binding protein.

Harris SD, et al. (2009 Mar). Morphology and development in Aspergillus nidulans: a complex puzzle.

Van Damme P, et al. (2012 Jul 31). N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB.

Krol K, et al. (2013 Sep). RrmA regulates the stability of specific transcripts in response to both nitrogen source and oxidative stress.

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 1 genes with posterior transmembrane prediction > 50%

FOG02883
EOG8QBZPJ

sce:PAB1

Genes: 34

SGD Description
Poly(A) binding protein; part of the 3'-end RNA-processing complex, mediates interactions between the 5' cap structure and the 3' mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G; stimulates, but is not required for the deadenylation activity of the Pan2p-Pan3p poly(A)-ribonuclease complex


PomBase Description
mRNA export shuttling protein


AspGD Description
Ortholog(s) have mRNA binding, poly(A) binding, ribonuclease inhibitor activity and role in regulation of nuclear-transcribed mRNA poly(A) tail shortening, regulation of translational initiation


References

Adam SA, et al. (1986 Aug). mRNA polyadenylate-binding protein: gene isolation and sequencing and identification of a ribonucleoprotein consensus sequence.

Sachs AB, et al. (1986 Jun 20). A single gene from yeast for both nuclear and cytoplasmic polyadenylate-binding proteins: domain structure and expression.

Sachs AB, et al. (1987 Sep). A single domain of yeast poly(A)-binding protein is necessary and sufficient for RNA binding and cell viability.

Bernstein P, et al. (1989 Feb). The poly(A)-poly(A)-binding protein complex is a major determinant of mRNA stability in vitro.

Sachs AB, et al. (1989 Sep 8). The poly(A) binding protein is required for poly(A) shortening and 60S ribosomal subunit-dependent translation initiation.

Burd CG, et al. (1991 Jul). The multiple RNA-binding domains of the mRNA poly(A)-binding protein have different RNA-binding activities.

Anderson JT, et al. (1993 Oct). PUB1 is a major nuclear and cytoplasmic polyadenylated RNA-binding protein in Saccharomyces cerevisiae.

Cockell M, et al. (1994 Jan 11). The yeast protein encoded by PUB1 binds T-rich single stranded DNA.

Caponigro G, et al. (1995 Oct 1). Multiple functions for the poly(A)-binding protein in mRNA decapping and deadenylation in yeast.

Marhoul JF, et al. (1996 Dec). Aspergillus fabM encodes an essential product that is related to poly(A)-binding proteins and activates development when overexpressed.

Tarun SZ Jr, et al. (1996 Dec 16). Association of the yeast poly(A) tail binding protein with translation initiation factor eIF-4G.

Garrels JI, et al. (1997 Aug). Proteome studies of Saccharomyces cerevisiae: identification and characterization of abundant proteins.

Tarun SZ Jr, et al. (1997 Aug 19). Translation initiation factor eIF4G mediates in vitro poly(A) tail-dependent translation.

Amrani N, et al. (1997 Jul). Yeast Pab1 interacts with Rna15 and participates in the control of the poly(A) tail length in vitro.

Minvielle-Sebastia L, et al. (1997 Jul 22). The major yeast poly(A)-binding protein is associated with cleavage factor IA and functions in premessenger RNA 3'-end formation.

Deardorff JA, et al. (1997 May 30). Differential effects of aromatic and charged residue substitutions in the RNA binding domains of the yeast poly(A)-binding protein.

Mangus DA, et al. (1998 Dec). Pbp1p, a factor interacting with Saccharomyces cerevisiae poly(A)-binding protein, regulates polyadenylation.

Kessler SH, et al. (1998 Jan). RNA recognition motif 2 of yeast Pab1p is required for its functional interaction with eukaryotic translation initiation factor 4G.

Wells SE, et al. (1998 Jul). Circularization of mRNA by eukaryotic translation initiation factors.

Coller JM, et al. (1998 Oct 15). mRNA stabilization by poly(A) binding protein is independent of poly(A) and requires translation.

Otero LJ, et al. (1999 Jun 1). The yeast poly(A)-binding protein Pab1p stimulates in vitro poly(A)-dependent and cap-dependent translation by distinct mechanisms.

Vilela C, et al. (2000 Aug 15). The eukaryotic mRNA decapping protein Dcp1 interacts physically and functionally with the eIF4F translation initiation complex.

Horton LE, et al. (2001 Apr 27). The yeast hsp70 homologue Ssa is required for translation and interacts with Sis1 and Pab1 on translating ribosomes.

Tharun S, et al. (2001 Nov). Targeting an mRNA for decapping: displacement of translation factors and association of the Lsm1p-7p complex on deadenylated yeast mRNAs.

Kozlov G, et al. (2002 Jun 21). Solution structure of the orphan PABC domain from Saccharomyces cerevisiae poly(A)-binding protein.

Tucker M, et al. (2002 Mar 15). Ccr4p is the catalytic subunit of a Ccr4p/Pop2p/Notp mRNA deadenylase complex in Saccharomyces cerevisiae.

Cosson B, et al. (2002 May). Poly(A)-binding protein acts in translation termination via eukaryotic release factor 3 interaction and does not influence [PSI(+)] propagation.

Hosoda N, et al. (2003 Oct 3). Translation termination factor eRF3 mediates mRNA decay through the regulation of deadenylation.

Mangus DA, et al. (2004 Jun). Positive and negative regulation of poly(A) nuclease.

Trautwein M, et al. (2004 Nov). Arf1p provides an unexpected link between COPI vesicles and mRNA in Saccharomyces cerevisiae.

Amrani N, et al. (2004 Nov 4). A faux 3'-UTR promotes aberrant termination and triggers nonsense-mediated mRNA decay.

Kobayashi T, et al. (2004 Oct 29). The GTP-binding release factor eRF3 as a key mediator coupling translation termination to mRNA decay.

Brune C, et al. (2005 Apr). Yeast poly(A)-binding protein Pab1 shuttles between the nucleus and the cytoplasm and functions in mRNA export.

Dunn EF, et al. (2005 Jan 1). Yeast poly(A)-binding protein, Pab1, and PAN, a poly(A) nuclease complex recruited by Pab1, connect mRNA biogenesis to export.

Keeling KM, et al. (2006 Jul). Tpa1p is part of an mRNP complex that influences translation termination, mRNA deadenylation, and mRNA turnover in Saccharomyces cerevisiae.

Oh YT, et al. (2010 Mar). Proteomic analysis of early phase of conidia germination in Aspergillus nidulans.

Wendland J, et al. (2011 Dec). Genome evolution in the eremothecium clade of the Saccharomyces complex revealed by comparative genomics.

Starita LM, et al. (2012 Jan). Sites of ubiquitin attachment in Saccharomyces cerevisiae.

Low JK, et al. (2013 Sep 6). Analysis of the proteome of Saccharomyces cerevisiae for methylarginine.

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%

FOG02884
EOG8QBZPJ

sce:HRP1

Genes: 33

SGD Description
Subunit of cleavage factor I; cleavage factor I is a five-subunit complex required for the cleavage and polyadenylation of pre-mRNA 3' ends; RRM-containing heteronuclear RNA binding protein and hnRNPA/B family member that binds to poly (A) signal sequences; required for genome stability


PomBase Description
mRNA cleavage factor complex subunit Msi2


References

Henry M, et al. (1996 Jan). Potential RNA binding proteins in Saccharomyces cerevisiae identified as suppressors of temperature-sensitive mutations in NPL3.

Kessler MM, et al. (1997 Oct 1). Hrp1, a sequence-specific RNA-binding protein that shuttles between the nucleus and the cytoplasm, is required for mRNA 3'-end formation in yeast.

Minvielle-Sebastia L, et al. (1998 Dec 15). Control of cleavage site selection during mRNA 3' end formation by a yeast hnRNP.

Chen S, et al. (1998 Nov 1). A specific RNA-protein interaction at yeast polyadenylation efficiency elements.

González CI, et al. (2000 Mar). The yeast hnRNP-like protein Hrp1/Nab4 marks a transcript for nonsense-mediated mRNA decay.

Gross S, et al. (2001 May 22). Five subunits are required for reconstitution of the cleavage and polyadenylation activities of Saccharomyces cerevisiae cleavage factor I.

Hammell CM, et al. (2002 Sep). Coupling of termination, 3' processing, and mRNA export.

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 1 genes with posterior transmembrane prediction > 50%

FOG02885
EOG8QBZPJ

sce:NOP4

Genes: 33

SGD Description
Nucleolar protein; essential for processing and maturation of 27S pre-rRNA and large ribosomal subunit biogenesis; constituent of 66S pre-ribosomal particles; contains four RNA recognition motifs (RRMs)


PomBase Description
RNA-binding protein Nop4 (predicted)


AspGD Description
Ortholog(s) have role in cellular response to drug and nucleolus localization


References

Bergès T, et al. (1994 Jul 1). Synthetic lethality with fibrillarin identifies NOP77p, a nucleolar protein required for pre-rRNA processing and modification.

Sun C, et al. (1994 Jul 1). The yeast NOP4 gene product is an essential nucleolar protein required for pre-rRNA processing and accumulation of 60S ribosomal subunits.

Chen D, et al. (2003 Jan). Global transcriptional responses of fission yeast to environmental stress.

Gruhler A, et al. (2005 Mar). Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway.

Wilson-Grady JT, et al. (2008 Mar). Phosphoproteome analysis of fission yeast.

Hagiwara D, et al. (2009 Nov). Transcriptional profiling for Aspergillusnidulans HogA MAPK signaling pathway in response to fludioxonil and osmotic stress.

Zhang K, et al. (2011 Mar 25). Clr4/Suv39 and RNA quality control factors cooperate to trigger RNAi and suppress antisense RNA.

Chen JS, et al. (2013 May). Comprehensive proteomics analysis reveals new substrates and regulators of the fission yeast clp1/cdc14 phosphatase.

Carpy A, et al. (2014 Aug). Absolute proteome and phosphoproteome dynamics during the cell cycle of Schizosaccharomyces pombe (Fission Yeast).

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%

FOG02886
EOG8QBZPJ

sce:NOP13

Genes: 32

SGD Description
Nucleolar protein found in preribosomal complexes; contains an RNA recognition motif (RRM); relative distribution to the nucleolus increases upon DNA replication stress


PomBase Description
RNA-binding protein Rnp24


AspGD Description
Ortholog(s) have nucleolus localization


References

VanHoy RW, et al. (1996 Mar). Molecular analysis of a novel schizosaccharomyces pombe gene containing two RNP consensus-sequence RNA-binding domains.

Wu K, et al. (2001 Jul 15). Nucleolar protein Nop12p participates in synthesis of 25S rRNA in Saccharomyces cerevisiae.

Gruhler A, et al. (2005 Mar). Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway.

Zhang K, et al. (2011 Mar 25). Clr4/Suv39 and RNA quality control factors cooperate to trigger RNAi and suppress antisense RNA.

Chen JS, et al. (2013 May). Comprehensive proteomics analysis reveals new substrates and regulators of the fission yeast clp1/cdc14 phosphatase.

Wang J, et al. (2013 Sep 1). Epe1 recruits BET family bromodomain protein Bdf2 to establish heterochromatin boundaries.

Carpy A, et al. (2014 Aug). Absolute proteome and phosphoproteome dynamics during the cell cycle of Schizosaccharomyces pombe (Fission Yeast).

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%

FOG02887
EOG8QBZPJ

sce:NOP12

Genes: 32

SGD Description
Nucleolar protein involved in pre-25S rRNA processing; also involved in biogenesis of large 60S ribosomal subunit; contains an RNA recognition motif (RRM); binds to Ebp2; similar to Nop13p and Nsr1p


PomBase Description
RNA-binding protein Nop12 (predicted)


AspGD Description
Ortholog(s) have nucleolus localization


References

Wu K, et al. (2001 Jul 15). Nucleolar protein Nop12p participates in synthesis of 25S rRNA in Saccharomyces cerevisiae.

Zhang K, et al. (2011 Mar 25). Clr4/Suv39 and RNA quality control factors cooperate to trigger RNAi and suppress antisense RNA.

Chen JS, et al. (2013 May). Comprehensive proteomics analysis reveals new substrates and regulators of the fission yeast clp1/cdc14 phosphatase.

Carpy A, et al. (2014 Aug). Absolute proteome and phosphoproteome dynamics during the cell cycle of Schizosaccharomyces pombe (Fission Yeast).

Sideri T, et al. (2014 Dec 1). Parallel profiling of fission yeast deletion mutants for proliferation and for lifespan during long-term quiescence.

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%

FOG02888
EOG8QBZPJ

sce:IST3

Genes: 31

SGD Description
Component of the U2 snRNP; required for the first catalytic step of splicing and for spliceosomal assembly; interacts with Rds3p and is required for Mer1p-activated splicing; diploid mutants have a specific defect in MATa1 pre-mRNA splicing which leads to haploid gene expression in diploids


PomBase Description
RNA-binding protein Cwf29


AspGD Description
Has domain(s) with predicted nucleic acid binding, nucleotide binding activity


References

Guiard B, et al. (1976). Complete amino acid sequence of the heme-binding core in bakers' yeast cytochrome b2 (L-(+)-lactate dehydrogenase).

Gottschalk A, et al. (2001 May). A novel yeast U2 snRNP protein, Snu17p, is required for the first catalytic step of splicing and for progression of spliceosome assembly.

Ohi MD, et al. (2002 Apr). Proteomics analysis reveals stable multiprotein complexes in both fission and budding yeasts containing Myb-related Cdc5p/Cef1p, novel pre-mRNA splicing factors, and snRNAs.

Stevens SW, et al. (2002 Jan). Composition and functional characterization of the yeast spliceosomal penta-snRNP.

Wang Q, et al. (2003 Oct). Rds3p is required for stable U2 snRNP recruitment to the splicing apparatus.

Spingola M, et al. (2004). Mer1p is a modular splicing factor whose function depends on the conserved U2 snRNP protein Snu17p.

Dziembowski A, et al. (2004 Dec 8). Proteomic analysis identifies a new complex required for nuclear pre-mRNA retention and splicing.

Carnahan RH, et al. (2005 Mar). Dim1p is required for efficient splicing and export of mRNA encoding lid1p, a component of the fission yeast anaphase-promoting complex.

Wilson-Grady JT, et al. (2008 Mar). Phosphoproteome analysis of fission yeast.

Beltrao P, et al. (2009 Jun 16). Evolution of phosphoregulation: comparison of phosphorylation patterns across yeast species.

Ren L, et al. (2011 Feb 28). Systematic two-hybrid and comparative proteomic analyses reveal novel yeast pre-mRNA splicing factors connected to Prp19.

Carpy A, et al. (2014 Aug). Absolute proteome and phosphoproteome dynamics during the cell cycle of Schizosaccharomyces pombe (Fission Yeast).

Burr R, et al. (2017 Sep 29). Dsc E3 ligase localization to the Golgi requires the ATPase Cdc48 and cofactor Ufd1 for activation of sterol regulatory element-binding protein in fission yeast.

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%

FOG02889
EOG8QBZPJ

sce:PUB1

Genes: 31

SGD Description
Poly (A)+ RNA-binding protein; abundant mRNP-component protein that binds mRNA and is required for stability of many mRNAs; component of glucose deprivation induced stress granules, involved in P-body-dependent granule assembly; protein abundance increases in response to DNA replication stress


AspGD Description
Ortholog(s) have mRNA binding, poly(U) RNA binding activity and role in nuclear-transcribed mRNA catabolic process, nonsense-mediated decay, regulation of mRNA stability, stress granule assembly


References

Ripmaster TL, et al. (1993 Jul 11). A protein containing conserved RNA-recognition motifs is associated with ribosomal subunits in Saccharomyces cerevisiae.

Anderson JT, et al. (1993 Oct). PUB1 is a major nuclear and cytoplasmic polyadenylated RNA-binding protein in Saccharomyces cerevisiae.

Matunis MJ, et al. (1993 Oct). PUB1: a major yeast poly(A)+ RNA-binding protein.

Cockell M, et al. (1994 Jan 11). The yeast protein encoded by PUB1 binds T-rich single stranded DNA.

Garrels JI, et al. (1997 Aug). Proteome studies of Saccharomyces cerevisiae: identification and characterization of abundant proteins.

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%

FOG02890
EOG8QBZPJ

sce:HSH49

Genes: 30

SGD Description
U2-snRNP associated splicing factor; similar to the mammalian splicing factor SAP49; proposed to function as a U2-snRNP assembly factor along with Hsh155p and binding partner Cus1p; contains two RNA recognition motifs (RRM)


PomBase Description
U2 snRNP-associated RNA-binding protein Sap49


AspGD Description
Ortholog(s) have U2 snRNP, cytosol localization


References

VanHoy RW, et al. (1996 Mar). Molecular analysis of a novel schizosaccharomyces pombe gene containing two RNP consensus-sequence RNA-binding domains.

Wang Q, et al. (2003 Oct). Rds3p is required for stable U2 snRNP recruitment to the splicing apparatus.

Carnahan RH, et al. (2005 Mar). Dim1p is required for efficient splicing and export of mRNA encoding lid1p, a component of the fission yeast anaphase-promoting complex.

Ren L, et al. (2011 Feb 28). Systematic two-hybrid and comparative proteomic analyses reveal novel yeast pre-mRNA splicing factors connected to Prp19.

Shao W, et al. (2012 Jan). A U1-U2 snRNP interaction network during intron definition.

Carpy A, et al. (2014 Aug). Absolute proteome and phosphoproteome dynamics during the cell cycle of Schizosaccharomyces pombe (Fission Yeast).

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%

FOG02891
EOG8QBZPJ

sce:SNP1

Genes: 30

SGD Description
Component of U1 snRNP required for mRNA splicing via spliceosome; substrate of the arginine methyltransferase Hmt1p; may interact with poly(A) polymerase to regulate polyadenylation; homolog of human U1 70K protein; protein abundance increases in response to DNA replication stress


PomBase Description
U1 snRNP-associated protein Usp101


AspGD Description
Ortholog(s) have U1 snRNP, cytosol localization


References

Smith V, et al. (1991 Sep). Cloning of a yeast U1 snRNP 70K protein homologue: functional conservation of an RNA-binding domain between humans and yeast.

Kao HY, et al. (1992 Aug 11). The yeast homolog of the U1 snRNP protein 70K is encoded by the SNP1 gene.

Hilleren PJ, et al. (1995). The RRM domain is dispensable for yeast U1-70K function.

Hilleren PJ, et al. (1995 Nov). The amino-terminal domain of yeast U1-70K is necessary and sufficient for function.

Neubauer G, et al. (1997 Jan 21). Identification of the proteins of the yeast U1 small nuclear ribonucleoprotein complex by mass spectrometry.

Gottschalk A, et al. (1998 Apr). A comprehensive biochemical and genetic analysis of the yeast U1 snRNP reveals five novel proteins.

Zhang D, et al. (1999 Mar 1). Identification of eight proteins that cross-link to pre-mRNA in the yeast commitment complex.

Awasthi S, et al. (2001 Aug 17). New roles for the Snp1 and Exo84 proteins in yeast pre-mRNA splicing.

Stevens SW, et al. (2002 Jan). Composition and functional characterization of the yeast spliceosomal penta-snRNP.

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%

FOG02892
EOG8QBZPJ

sce:SGN1

Genes: 29

SGD Description
Cytoplasmic RNA-binding protein; contains an RNA recognition motif (RRM); may have a role in mRNA translation, as suggested by genetic interactions with genes encoding proteins involved in translational initiation


PomBase Description
poly(A) binding protein Pab2


AspGD Description
Ortholog(s) have poly(A) binding activity, role in nuclear-transcribed mRNA poly(A) tail shortening and Mmi1 nuclear focus complex, cytoplasm, nuclear chromatin, nucleolus, nucleoplasm, polysome localization


References

Guiard B, et al. (1976). Complete amino acid sequence of the heme-binding core in bakers' yeast cytochrome b2 (L-(+)-lactate dehydrogenase).

Winstall E, et al. (2000 Jul 21). The Saccharomyces cerevisiae RNA-binding protein Rbp29 functions in cytoplasmic mRNA metabolism.

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%

FOG02893
EOG8QBZPJ

sce:RNA15

Genes: 28

SGD Description
Component of the cleavage and polyadenylation factor I (CF I); CF 1, composed of the CF 1A complex (Rna14p, Rna15p, Clp1p, Pcf11p) and Hrp1, is involved in cleavage and polyadenylation of mRNA 3' ends; interacts with the A-rich polyadenylation signal in complex with Rna14p and Hrp1p; mutant displays reduced transcription elongation in the G-less-based run-on (GLRO) assay; required for gene looping and maintenance of genome stability


PomBase Description
RNA-binding protein Rna15


AspGD Description
Ortholog(s) have cytosol, mRNA cleavage and polyadenylation specificity factor complex localization


References

Minvielle-Sebastia L, et al. (1991 Jun). Mutations in the yeast RNA14 and RNA15 genes result in an abnormal mRNA decay rate; sequence analysis reveals an RNA-binding domain in the RNA15 protein.

Minvielle-Sebastia L, et al. (1994 Dec 9). RNA14 and RNA15 proteins as components of a yeast pre-mRNA 3'-end processing factor.

Kessler MM, et al. (1996 Oct 25). Purification of the Saccharomyces cerevisiae cleavage/polyadenylation factor I. Separation into two components that are required for both cleavage and polyadenylation of mRNA 3' ends.

Amrani N, et al. (1997 Jul). Yeast Pab1 interacts with Rna15 and participates in the control of the poly(A) tail length in vitro.

Feuermann M, et al. (1997 Jul). The characterization of two new clusters of duplicated genes suggests a 'Lego' organization of the yeast Saccharomyces cerevisiae chromosomes.

Gross S, et al. (2001 Dec). Rna15 interaction with the A-rich yeast polyadenylation signal is an essential step in mRNA 3'-end formation.

Gross S, et al. (2001 May 22). Five subunits are required for reconstitution of the cleavage and polyadenylation activities of Saccharomyces cerevisiae cleavage factor I.

Wilson-Grady JT, et al. (2008 Mar). Phosphoproteome analysis of fission yeast.

Beltrao P, et al. (2009 Jun 16). Evolution of phosphoregulation: comparison of phosphorylation patterns across yeast species.

Yamanaka S, et al. (2010 Jul 7). Importance of polyadenylation in the selective elimination of meiotic mRNAs in growing S. pombe cells.

Pancaldi V, et al. (2012 Apr). Predicting the fission yeast protein interaction network.

Paulson AR, et al. (2012 Jun). Crystal structure of the Rna14-Rna15 complex.

Carpy A, et al. (2014 Aug). Absolute proteome and phosphoproteome dynamics during the cell cycle of Schizosaccharomyces pombe (Fission Yeast).

Swaffer MP, et al. (2016 Dec 15). CDK Substrate Phosphorylation and Ordering the Cell Cycle.

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%

FOG02894
EOG8QBZPJ

sce:absent

Genes: 17

 





 

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%

FOG02895
EOG8HT79J
EOG8QBZPJ

sce:PES4

Genes: 17

SGD Description
Poly(A) binding protein, suppressor of DNA polymerase epsilon mutation; PES4 has a paralog, MIP6, that arose from the whole genome duplication

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%

FOG02896
EOG8QBZPJ

sce:absent

Genes: 7

AspGD Description
Has domain(s) with predicted nucleic acid binding, nucleotide binding activity

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%

FOG02897
EOG8QBZPJ

sce:absent

Genes: 5

AspGD Description
Glycine-rich RNA-binding protein


References

Malavazi I, et al. (2007 Oct). Transcriptome analysis of the Aspergillus nidulans AtmA (ATM, Ataxia-Telangiectasia mutated) null mutant.

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%

FOG02898
EOG8QBZPJ

sce:absent

Genes: 9

PomBase Description
RNA-binding protein Csx1|RNA-binding protein involved in histone acetylation|U1 snRNP-associated protein Usp109|mRNA cleavage and polyadenylation specificity factor complex subunit Ctf1


References

Aranda A, et al. (2001 May). Transcriptional termination factors for RNA polymerase II in yeast.

Roguev A, et al. (2004 Feb). A comparative analysis of an orthologous proteomic environment in the yeasts Saccharomyces cerevisiae and Schizosaccharomyces pombe.

Beltrao P, et al. (2009 Jun 16). Evolution of phosphoregulation: comparison of phosphorylation patterns across yeast species.

Han TX, et al. (2010). Global fitness profiling of fission yeast deletion strains by barcode sequencing.

Takeda K, et al. (2011). Identification of genes affecting the toxicity of anti-cancer drug bortezomib by genome-wide screening in S. pombe.

Henry TC, et al. (2011 Feb). Systematic screen of Schizosaccharomyces pombe deletion collection uncovers parallel evolution of the phosphate signal transduction pathway in yeasts.

Carpy A, et al. (2014 Aug). Absolute proteome and phosphoproteome dynamics during the cell cycle of Schizosaccharomyces pombe (Fission Yeast).

Vanoosthuyse V, et al. (2014 Jun). CPF-associated phosphatase activity opposes condensin-mediated chromosome condensation.

Beckley JR, et al. (2015 Dec). A Degenerate Cohort of Yeast Membrane Trafficking DUBs Mediates Cell Polarity and Survival.

Estill M, et al. (2015 May). Dissection of the PHO pathway in Schizosaccharomyces pombe using epistasis and the alternate repressor adenine.

Dudin O, et al. (2017 Apr). A systematic screen for morphological abnormalities during fission yeast sexual reproduction identifies a mechanism of actin aster formation for cell fusion.

Sonkar A, et al. (2017 May 31). Fission yeast Ctf1, a cleavage and polyadenylation factor subunit is required for the maintenance of genomic integrity.

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 1 genes with posterior transmembrane prediction > 50%

FOG02899
EOG8HT79J

sce:MIP6

Genes: 1

SGD Description
Putative RNA-binding protein; interacts with Mex67p, which is a component of the nuclear pore involved in nuclear mRNA export; MIP6 has a paralog, PES4, that arose from the whole genome duplication


References

Segref A, et al. (1997 Jun 2). Mex67p, a novel factor for nuclear mRNA export, binds to both poly(A)+ RNA and nuclear pores.

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%