FOG00261
EOG8MGQTH

sce:RPB9

Genes: 33

Protein description
RNA polymerase subunit


SGD Description
RNA polymerase II subunit B12.6; contacts DNA; mutations affect transcription start site selection and fidelity of transcription


PomBase Description
DNA-directed RNA polymerase II complex subunit Rpb9


AspGD Description
DNA-directed RNA polymerase


References

Woychik NA, et al. (1991 Oct 5). Yeast RNA polymerase II subunit RPB9 is essential for growth at temperature extremes.

Sakurai H, et al. (1998 Oct 9). Identification of the gene and the protein of RNA polymerase II subunit 9 (Rpb9) from the fission yeast Schizosacharomyces pombe.

Sakurai H, et al. (1999 Nov). The Rpb4 subunit of fission yeast Schizosaccharomyces pombe RNA polymerase II is essential for cell viability and similar in structure to the corresponding subunits of higher eukaryotes.

Kimura M, et al. (2000 Feb 15). Involvement of multiple subunit-subunit contacts in the assembly of RNA polymerase II.

Hemming SA, et al. (2000 Nov 10). RNA polymerase II subunit Rpb9 regulates transcription elongation in vivo.

Kimura M, et al. (2001 Feb). Intracellular contents and assembly states of all 12 subunits of the RNA polymerase II in the fission yeast Schizosaccharomyces pombe.

Cramer P, et al. (2001 Jun 8). Structural basis of transcription: RNA polymerase II at 2.8 angstrom resolution.

Gnatt AL, et al. (2001 Jun 8). Structural basis of transcription: an RNA polymerase II elongation complex at 3.3 A resolution.

Bushnell DA, et al. (2002 Feb 5). Structural basis of transcription: alpha-amanitin-RNA polymerase II cocrystal at 2.8 A resolution.

Kimura M, et al. (2002 Mar). Formation of a carboxy-terminal domain phosphatase (Fcp1)/TFIIF/RNA polymerase II (pol II) complex in Schizosaccharomyces pombe involves direct interaction between Fcp1 and the Rpb4 subunit of pol II.

Sakurai H, et al. (2002 Mar). Level of the RNA polymerase II in the fission yeast stays constant but phosphorylation of its carboxyl terminal domain varies depending on the phase and rate of cell growth.

Li S, et al. (2002 Nov 1). Rpb4 and Rpb9 mediate subpathways of transcription-coupled DNA repair in Saccharomyces cerevisiae.

Kettenberger H, et al. (2003 Aug 8). Architecture of the RNA polymerase II-TFIIS complex and implications for mRNA cleavage.

Armache KJ, et al. (2003 Jun 10). Architecture of initiation-competent 12-subunit RNA polymerase II.

Bushnell DA, et al. (2003 Jun 10). Complete, 12-subunit RNA polymerase II at 4.1-A resolution: implications for the initiation of transcription.

Chung WH, et al. (2003 Oct). RNA polymerase II/TFIIF structure and conserved organization of the initiation complex.

Kettenberger H, et al. (2004 Dec 22). Complete RNA polymerase II elongation complex structure and its interactions with NTP and TFIIS.

Bushnell DA, et al. (2004 Feb 13). Structural basis of transcription: an RNA polymerase II-TFIIB cocrystal at 4.5 Angstroms.

Westover KD, et al. (2004 Nov 12). Structural basis of transcription: nucleotide selection by rotation in the RNA polymerase II active center.

Armache KJ, et al. (2005 Feb 25). Structures of complete RNA polymerase II and its subcomplex, Rpb4/7.

Hayashi K, et al. (2005 Mar). Studies of Schizosaccharomyces pombe TFIIE indicate conformational and functional changes in RNA polymerase II at transcription initiation.

Kettenberger H, et al. (2006 Jan). Structure of an RNA polymerase II-RNA inhibitor complex elucidates transcription regulation by noncoding RNAs.

Meyer PA, et al. (2006 Jun). Phasing RNA polymerase II using intrinsically bound Zn atoms: an updated structural model.

Dixon SJ, et al. (2008 Oct 28). Significant conservation of synthetic lethal genetic interaction networks between distantly related eukaryotes.

Spåhr H, et al. (2009 Jun 9). Schizosacharomyces pombe RNA polymerase II at 3.6-A resolution.

Zhang L, et al. (2013). Genome-wide screening for genes associated with valproic acid sensitivity in fission yeast.

Anver S, et al. (2014 Aug). Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts.

Mojardín L, et al. (2015). Chromosome segregation and organization are targets of 5'-Fluorouracil in eukaryotic cells.

Verrier L, et al. (2015 May). Global regulation of heterochromatin spreading by Leo1.

Larson A, et al. (2016 Jun 1). Interconnections Between RNA-Processing Pathways Revealed by a Sequencing-Based Genetic Screen for Pre-mRNA Splicing Mutants in Fission Yeast.

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 4 genes with posterior transmembrane prediction > 50%