FOG04934
EOG8254BQ
EOG87D81B
EOG8G4F97

sce:RIM9

Genes: 25

SGD Description
Plasma membrane protein of unknown function; involved in the proteolytic activation of Rim101p in response to alkaline pH; interacts with Rim21p and Dfg16p to form a pH-sensing complex in the Rim101 pathway and is required to maintain Rim21p levels; has similarity to A. nidulans PalI;


PomBase Description
Tea1-interacting protein involved in exocytosis


AspGD Description
Ortholog(s) have cell septum, plasma membrane localization


References

Payne MJ, et al. (1993 Jul-Aug). Characterization of a second nuclear gene, AEP1, required for expression of the mitochondrial OLI1 gene in Saccharomyces cerevisiae.

Arst HN Jr, et al. (1994 Dec 15). Two new genes involved in signalling ambient pH in Aspergillus nidulans.

Li W, et al. (1997 Jan). Proteolytic activation of Rim1p, a positive regulator of yeast sporulation and invasive growth.

Clutterbuck AJ, et al. (1997 Jun). The validity of the Aspergillus nidulans linkage map.

Denison SH, et al. (1998 Oct). Putative membrane components of signal transduction pathways for ambient pH regulation in Aspergillus and meiosis in saccharomyces are homologous.

Negrete-Urtasun S, et al. (1999 Sep). Ambient pH signal transduction in Aspergillus: completion of gene characterization.

Denison SH, et al. (2000 Mar). pH regulation of gene expression in fungi.

Denison SH, et al. (2001 Jan). Putative membrane components of signal transduction pathways for ambient pH regulation in Aspergillus and meiosis in Saccharomyces are homologous Addendum.

Gonzalez-Lopez CI, et al. (2002 Feb). Genetic control of extracellular protease synthesis in the yeast Yarrowia lipolytica.

Mata J, et al. (2002 Sep). The transcriptional program of meiosis and sporulation in fission yeast.

Peñalva MA, et al. (2002 Sep). Regulation of gene expression by ambient pH in filamentous fungi and yeasts.

Arst HN, et al. (2003 Apr). pH regulation in Aspergillus and parallels with higher eukaryotic regulatory systems.

Peñalva MA, et al. (2004). Recent advances in the characterization of ambient pH regulation of gene expression in filamentous fungi and yeasts.

Herranz S, et al. (2005 Aug 23). Arrestin-related proteins mediate pH signaling in fungi.

Martín-Castellanos C, et al. (2005 Nov 22). A large-scale screen in S. pombe identifies seven novel genes required for critical meiotic events.

Kim H, et al. (2006 Jul 25). A global topology map of the Saccharomyces cerevisiae membrane proteome.

Calcagno-Pizarelli AM, et al. (2007 Dec). Establishment of the ambient pH signaling complex in Aspergillus nidulans: PalI assists plasma membrane localization of PalH.

Peñas MM, et al. (2007 Jun). Further characterization of the signaling proteolysis step in the Aspergillus nidulans pH signal transduction pathway.

Blanchin-Roland S, et al. (2008 Jun). Ambient pH signalling in the yeast Yarrowia lipolytica involves YlRim23p/PalC, which interacts with Snf7p/Vps32p, but does not require the long C terminus of YlRim9p/PalI.

Peñalva MA, et al. (2008 Jun). Ambient pH gene regulation in fungi: making connections.

Beltrao P, et al. (2009 Jun 16). Evolution of phosphoregulation: comparison of phosphorylation patterns across yeast species.

Han TX, et al. (2010). Global fitness profiling of fission yeast deletion strains by barcode sequencing.

Takeda K, et al. (2011). Identification of genes affecting the toxicity of anti-cancer drug bortezomib by genome-wide screening in S. pombe.

Stewart EV, et al. (2011 Apr 22). Yeast SREBP cleavage activation requires the Golgi Dsc E3 ligase complex.

Snaith HA, et al. (2011 Jul 1). Characterization of Mug33 reveals complementary roles for actin cable-dependent transport and exocyst regulators in fission yeast exocytosis.

Rossi A, et al. (2013 Nov). Ambient pH sensing in filamentous fungi: pitfalls in elucidating regulatory hierarchical signaling networks.

Anver S, et al. (2014 Aug). Yeast X-chromosome-associated protein 5 (Xap5) functions with H2A.Z to suppress aberrant transcripts.

Carpy A, et al. (2014 Aug). Absolute proteome and phosphoproteome dynamics during the cell cycle of Schizosaccharomyces pombe (Fission Yeast).

Peñalva MA, et al. (2014 Dec). Liaison alcaline: Pals entice non-endosomal ESCRTs to the plasma membrane for pH signaling.

Rallis C, et al. (2014 Feb 15). Systematic screen for mutants resistant to TORC1 inhibition in fission yeast reveals genes involved in cellular ageing and growth.

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 25 genes with posterior transmembrane prediction > 50%

FOG04935
EOG8G4F97

sce:absent

Genes: 19

 





 

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 19 genes with posterior transmembrane prediction > 50%

FOG04936
EOG8G4F97

sce:DCV1;

Genes: 2

SGD Description
Protein of unknown function; deletion mutant shows strong genetic interaction with cdc28-as1 mutant in the presence of 1-NM-PP1; DCV1 has a paralog, YOL019W, that arose from the whole genome duplication|Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery and vacuole; YOL019W has a paralog, DCV1, that arose from the whole genome duplication


References

Sundin BA, et al. (2004 Jul 15). Localization of proteins that are coordinately expressed with Cln2 during the cell cycle.

Kim H, et al. (2006 Jul 25). A global topology map of the Saccharomyces cerevisiae membrane proteome.

Zimmermann C, et al. (2011 Nov 15). A chemical-genetic screen to unravel the genetic network of CDC28/CDK1 links ubiquitin and Rad6-Bre1 to cell cycle progression.

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 2 genes with posterior transmembrane prediction > 50%