FOG03749
EOG8Z350Z

sce:absent

Genes: 16

 





 

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%

FOG03750
EOG8Z350Z

sce:YHC1

Genes: 6

SGD Description
Component of the U1 snRNP complex required for pre-mRNA splicing; putative ortholog of human U1C protein, which is involved in formation of a complex between U1 snRNP and the pre-mRNA 5' splice site


References

Neubauer G, et al. (1997 Jan 21). Identification of the proteins of the yeast U1 small nuclear ribonucleoprotein complex by mass spectrometry.

Tang J, et al. (1997 Jul 1). Identification and characterization of a yeast homolog of U1 snRNP-specific protein C.

Gottschalk A, et al. (1998 Apr). A comprehensive biochemical and genetic analysis of the yeast U1 snRNP reveals five novel proteins.

Zhang D, et al. (1999 Mar 1). Identification of eight proteins that cross-link to pre-mRNA in the yeast commitment complex.

Chen JY, et al. (2001 Jan). Specific alterations of U1-C protein or U1 small nuclear RNA can eliminate the requirement of Prp28p, an essential DEAD box splicing factor.

Du H, et al. (2002 Sep 5). The U1 snRNP protein U1C recognizes the 5' splice site in the absence of base pairing.

Du H, et al. (2004 Oct 12). Effects of the U1C L13 mutation and temperature regulation of yeast commitment complex formation.

Fabrizio P, et al. (2009 Nov 25). The evolutionarily conserved core design of the catalytic activation step of the yeast spliceosome.

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%

FOG03751
EOG8Z350Z

sce:absent

Genes: 3

AspGD Description
Has domain(s) with predicted zinc ion binding activity

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%

FOG03752
EOG8Z350Z

sce:absent

Genes: 6

PomBase Description
U1 snRNP-associated protein Usp103|WW domain-binding protein Wbp4 (predicted)


AspGD Description
Has domain(s) with predicted nucleic acid binding, zinc ion binding activity, role in spliceosomal snRNP assembly and U1 snRNP, nucleus localization


References

Newo AN, et al. (2007). Proteomic analysis of the U1 snRNP of Schizosaccharomyces pombe reveals three essential organism-specific proteins.

Carpy A, et al. (2014 Aug). Absolute proteome and phosphoproteome dynamics during the cell cycle of Schizosaccharomyces pombe (Fission Yeast).

Lipp JJ, et al. (2015 Aug). SR protein kinases promote splicing of nonconsensus introns.

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%