FOG00034
EOG805QM7
RPL23
sce:RPL23A;RPL23B

Genes: 35

Protein description
RPL23 Large ribosome protein subunit


SGD Description
Ribosomal 60S subunit protein L23A; homologous to mammalian ribosomal protein L23 and bacterial L14; RPL23A has a paralog, RPL23B, that arose from the whole genome duplication|Ribosomal 60S subunit protein L23B; homologous to mammalian ribosomal protein L23 and bacterial L14; RPL23B has a paralog, RPL23A, that arose from the whole genome duplication


PomBase Description
60S ribosomal protein L23


AspGD Description
Ortholog(s) have cytosolic large ribosomal subunit, hyphal cell wall, mitochondrion, nucleus localization


References

Leer RJ, et al. (1984 Sep 11). Structural comparison of yeast ribosomal protein genes.

Berroteran RW, et al. (1995 Jun 30). Sequence, map position and genome organization of the RPL17B gene, encoding ribosomal protein L17b in Saccharomyces cerevisiae.

Planta RJ, et al. (1998 Mar 30). The list of cytoplasmic ribosomal proteins of Saccharomyces cerevisiae.

Spahn CM, et al. (2001 Nov 2). Structure of the 80S ribosome from Saccharomyces cerevisiae--tRNA-ribosome and subunit-subunit interactions.

Lee SW, et al. (2002 Apr 30). Direct mass spectrometric analysis of intact proteins of the yeast large ribosomal subunit using capillary LC/FTICR.

Spahn CM, et al. (2004 Mar 10). Domain movements of elongation factor eEF2 and the eukaryotic 80S ribosome facilitate tRNA translocation.

Porras-Yakushi TR, et al. (2005 Oct 14). A novel SET domain methyltransferase modifies ribosomal protein Rpl23ab in yeast.

Porras-Yakushi TR, et al. (2007 Apr 27). Yeast ribosomal/cytochrome c SET domain methyltransferase subfamily: identification of Rpl23ab methylation sites and recognition motifs.

Shirai A, et al. (2008 Apr 18). Global analysis of gel mobility of proteins and its use in target identification.

Keller C, et al. (2010 Jun). Proteomic and functional analysis of the noncanonical poly(A) polymerase Cid14.

Ben-Shem A, et al. (2010 Nov 26). Crystal structure of the eukaryotic ribosome.

Ben-Shem A, et al. (2011 Dec 16). The structure of the eukaryotic ribosome at 3.0 Å resolution.

Snaith HA, et al. (2011 Jul 1). Characterization of Mug33 reveals complementary roles for actin cable-dependent transport and exocyst regulators in fission yeast exocytosis.

Van Damme P, et al. (2012 Jul 31). N-terminal acetylome analyses and functional insights of the N-terminal acetyltransferase NatB.

Ban N, et al. (2014 Feb). A new system for naming ribosomal proteins.

Mathiassen SG, et al. (2015 Aug 21). A Two-step Protein Quality Control Pathway for a Misfolded DJ-1 Variant in Fission Yeast.

Murray J, et al. (2016 May 9). Structural characterization of ribosome recruitment and translocation by type IV IRES.

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%

FOG00035
EOG805QM7
RM38
sce:MRPL38

Genes: 34

Protein description
RM38 Mitochondrial large ribosome protein subunit


Parent
paralog?:FOG00034


SGD Description
Mitochondrial ribosomal protein of the large subunit; appears as two protein spots (YmL34 and YmL38) on two-dimensional SDS gels; protein abundance increases in response to DNA replication stress


PomBase Description
mitochondrial ribosomal protein subunit L38 (predicted)


AspGD Description
Ortholog(s) have structural constituent of ribosome activity and mitochondrial large ribosomal subunit localization


Suggested Analysis
Multiple sequence alignment reveals insertion (80) in mitochondrial ortholog, and loss of N-terminal sequence in cytoplasmic subunit leading to [m] localization


References

Grohmann L, et al. (1991 Jun 17). Extended N-terminal sequencing of proteins of the large ribosomal subunit from yeast mitochondria.

Kitakawa M, et al. (1997 Apr 15). Identification and characterization of the genes for mitochondrial ribosomal proteins of Saccharomyces cerevisiae.

Gan X, et al. (2002 Nov). Tag-mediated isolation of yeast mitochondrial ribosome and mass spectrometric identification of its new components.

Reinders J, et al. (2006 Jul). Toward the complete yeast mitochondrial proteome: multidimensional separation techniques for mitochondrial proteomics.

Rhind N, et al. (2011 May 20). Comparative functional genomics of the fission yeasts.

Amunts A, et al. (2014 Mar 28). Structure of the yeast mitochondrial large ribosomal subunit.

Pfeffer S, et al. (2015 Jan 22). Organization of the mitochondrial translation machinery studied in situ by cryoelectron tomography.

Mitochondrial localization predictions
Predotar	TargetP	MitoProt
Raw data
Phobius transmembrane predictions 0 genes with posterior transmembrane prediction > 50%